Shiny FASTA processor

A collection of Shiny applications to process FASTA sequence files.

Shiny NGLVieweR - Interact with Protein Data Bank files in the web browser

I build a Shiny application that can be used to interact with Protein Data Bank (PDB) and structural files in the web browser. The application won a grand prices at the Shiny programming contest.

NGLVieweR - Interact with Protein Data Bank files in R and Shiny

I build an R package that can be used to interact with Protein Data Bank (PDB) and structural files in R and Shiny.

MS/MS Peptide Fragment Annotator

I build a Shiny application for the annotation of peptide fragment ions.

Rstudio Table Contest - winning entry

For the RStudio Table Contest I build an interactive employee directory using DT and R Shiny. The entry won 1st place.

Editable DataTables in R shiny using SQL

This tutorial describes how to make a DataTable in Shiny with Add, Edit, Copy and Delete functionality. Entries are stored in a local SQL database which makes it possible to retrieve the data between sessions.

Protein Fragment Finder

A small Shiny application that can match fragment masses that are detected by Mass Spectrometry to a protein sequence.